Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxybenzoate polyprenyltransferase | SAMN04488090_1035 | Not Available | Positive | 1362325 - 1363173 | 29797.0 |
| 3-dehydroquinate synthase | SAMN04488090_1036 | Not Available | Positive | 1363222 - 1364376 | 42587.9 |
| hypothetical protein | SAMN04488090_1037 | Not Available | Positive | 1364409 - 1365599 | 45439.9 |
| predicted pyrophosphatase or phosphodiesterase, alkp superfamily | SAMN04488090_1038 | Not Available | Positive | 1365618 - 1366991 | 52047.2 |
| phnb protein | SAMN04488090_1039 | Not Available | Positive | 1367148 - 1367549 | 14840.9 |
| dna repair photolyase | SAMN04488090_1040 | Not Available | Positive | 1367686 - 1368732 | 39790.0 |
| predicted purr-regulated permease perm | SAMN04488090_1041 | Not Available | Positive | 1368949 - 1369971 | 37912.5 |
| alpha/beta hydrolase family protein | SAMN04488090_1042 | Not Available | Positive | 1369981 - 1370760 | 29632.4 |
| uncharacterized membrane protein | SAMN04488090_1043 | Not Available | Positive | 1370764 - 1371210 | 16971.5 |
| transcriptional regulator, arac family | SAMN04488090_1044 | Not Available | Negative | 1371211 - 1372050 | 32846.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
