Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhamnogalacturonyl hydrolase yesr | SAMN04488090_1025 | Not Available | Negative | 1349980 - 1351107 | 42814.1 |
| lysophospholipase l1 | SAMN04488090_1026 | Not Available | Negative | 1351188 - 1352480 | 47757.5 |
| predicted n-acetyltransferase yhbs | SAMN04488090_1027 | Not Available | Negative | 1352485 - 1352934 | 17122.4 |
| ribosomal large subunit pseudouridine synthase d | SAMN04488090_1028 | Not Available | Negative | 1352945 - 1353967 | 38953.6 |
| iron-regulated abc transporter membrane component sufb | SAMN04488090_1029 | Not Available | Negative | 1354144 - 1355589 | 53566.5 |
| transcriptional regulator, asnc family | SAMN04488090_1030 | Not Available | Negative | 1355659 - 1356138 | 17991.0 |
| uncharacterized membrane protein | SAMN04488090_1031 | Not Available | Positive | 1356888 - 1358123 | 43788.5 |
| unsaturated rhamnogalacturonyl hydrolase | SAMN04488090_1032 | Not Available | Positive | 1358304 - 1360205 | 72698.7 |
| hypothetical protein | SAMN04488090_1033 | Not Available | Positive | 1360320 - 1361147 | 31061.2 |
| hypothetical protein | SAMN04488090_1034 | Not Available | Positive | 1361161 - 1362165 | 37724.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
