Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_1014 | Not Available | Negative | 1338107 - 1340164 | 76646.5 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | SAMN04488090_1015 | Not Available | Negative | 1340222 - 1340968 | 26164.6 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN04488090_1016 | Not Available | Negative | 1341066 - 1341221 | 5548.74 |
| tetratricopeptide repeat-containing protein | SAMN04488090_1017 | Not Available | Negative | 1341230 - 1342990 | 68025.3 |
| smr domain-containing protein | SAMN04488090_1018 | Not Available | Positive | 1343165 - 1344106 | 35319.5 |
| protein of unknown function | SAMN04488090_1019 | Not Available | Positive | 1344078 - 1345556 | 54804.8 |
| ompa-ompf porin, oop family | SAMN04488090_1021 | Not Available | Positive | 1346098 - 1347765 | 61835.6 |
| ssu ribosomal protein s16p | SAMN04488090_1022 | Not Available | Positive | 1348011 - 1348556 | 19301.9 |
| 16s rrna processing protein rimm | SAMN04488090_1023 | Not Available | Positive | 1348647 - 1349213 | 21484.3 |
| trna (guanine37-n(1)-) methyltransferase | SAMN04488090_1024 | Not Available | Positive | 1349226 - 1349906 | 25262.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
