Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN04488090_1004 | Not Available | Positive | 1327256 - 1328191 | 33873.2 |
| acetyl esterase/lipase | SAMN04488090_1005 | Not Available | Positive | 1328215 - 1329129 | 32789.4 |
| transcriptional regulator, laci family | SAMN04488090_1006 | Not Available | Negative | 1329221 - 1330279 | 39064.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488090_1007 | Not Available | Positive | 1330560 - 1331171 | 24040.9 |
| predicted arabinose efflux permease, mfs family | SAMN04488090_1008 | Not Available | Positive | 1331288 - 1332475 | 42234.1 |
| poly(3-hydroxybutyrate) depolymerase | SAMN04488090_1009 | Not Available | Positive | 1332538 - 1335417 | 104675.0 |
| predicted n-acyltransferase, gnat family | SAMN04488090_1010 | Not Available | Positive | 1335414 - 1335950 | 20973.0 |
| addiction module antidote protein, higa family | SAMN04488090_1011 | Not Available | Positive | 1336031 - 1336522 | 18727.8 |
| nucleotidyl transferase abieii toxin, type iv ta system | SAMN04488090_1012 | Not Available | Positive | 1336519 - 1337178 | 24755.5 |
| predicted lipoprotein | SAMN04488090_1013 | Not Available | Negative | 1337179 - 1338057 | 33097.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
