Halomonas pantelleriensis strain AAP

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Oceanospirillales

Family

Halomonadaceae

Genus

Franzmannia

Description

Halomonas pantelleriensis strain AAP is a notable member of the Halomonadaceae family, characterized by its unique adaptation to hypersaline environments. This strain possesses a single replicon, which is significant for its genetic stability and replication efficiency in challenging ecological niches. The genomic data of Halomonas pantelleriensis strain AAP is documented under the accession number FNGH00000000.1, providing a reference for researchers interested in studying the genetic and functional attributes of this organism. Halomonas species are known for their ability to thrive in high-salinity conditions, which often poses challenges for microbial growth due to osmotic stress. This adaptability may be attributed to specialized mechanisms for osmoprotection and metabolic flexibility, allowing them to utilize various substrates for energy. The presence of only one replicon suggests a streamlined genetic organization that might facilitate rapid adaptation and survival in fluctuating environments. From a biological and ecological perspective, Halomonas pantelleriensis strain AAP could play a crucial role in biogeochemical cycles in saline environments. Its metabolic processes may contribute to nutrient cycling and the maintenance of microbial diversity in such extreme habitats. Understanding the genetics and physiology of this strain can provide insights into microbial resilience and potential applications in biotechnology, particularly in bioremediation and the production of bioactive compounds in saline conditions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderOceanospirillales
FamilyHalomonadaceae
GenusFranzmannia
SpeciesFranzmannia pantelleriensis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halomonas pantelleriensis strain AAP genome assembly, contig:

Gene Summary

Adenine Count

778989 bp

Thymine Count

805734 bp

Guanine Count

1429594 bp

Cytosine Count

1374970 bp

Genome Length

4402189 bp

Protein-coding Genes

4051 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
merr family transcriptional regulator, redox-sensitive transcriptional activator soxrSAMN05192555_10737Not AvailableNegative2182765 - 218321416468.7
atp-binding cassette, subfamily b, multidrug efflux pumpSAMN05192555_10738Not AvailablePositive2183286 - 218517269162.7
methyl-accepting chemotaxis sensory transducer with cache sensorSAMN05192555_10739Not AvailablePositive2185389 - 218737770509.6
2-iminobutanoate/2-iminopropanoate deaminaseSAMN05192555_10740Not AvailableNegative2187408 - 218779414423.1
transcriptional regulator /transcriptional regulator, lysr familySAMN05192555_10741Not AvailableNegative2187859 - 218883336643.8
membrane fusion protein, multidrug efflux systemSAMN05192555_10742Not AvailablePositive2189136 - 219034743654.6
multidrug efflux pumpSAMN05192555_10743Not AvailablePositive2190433 - 2193606113723.0
efflux transporter, outer membrane factor (omf) lipoprotein, nodt familySAMN05192555_10744Not AvailablePositive2193599 - 219503251702.3
peptidoglycan/xylan/chitin deacetylase, pgda/cda1 familySAMN05192555_10745Not AvailableNegative2195047 - 219690068470.4
alcohol dehydrogenaseSAMN05192555_10746Not AvailablePositive2197134 - 219817436451.8

Displaying genes 2011 – 2020 of 4116 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.