Sarcina sp. DSM 11001

Gram-positiveCoccianaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Sarcina

Description

Sarcina sp. DSM 11001 is a Gram-positive, anaerobic bacterium characterized by its cocci shape. This species is notable for its ability to thrive in environments devoid of oxygen. Sarcina sp. typically exhibits a unique arrangement, forming clusters or packets, which is a distinctive feature of the genus. The bacterium has a single replicon, indicating a streamlined genetic structure. This trait can be significant in understanding its replication and genetic stability. Furthermore, Sarcina sp. DSM 11001 possesses flagella, which may contribute to its motility in anaerobic conditions, although the specific role of flagella in this context requires further investigation. The accession number for Sarcina sp. DSM 11001 is FNFZ00000000.1, which provides a reference for researchers seeking genetic information about this strain. In terms of ecological insight, the anaerobic lifestyle of Sarcina sp. suggests that it may play a role in specific environments, such as those found in deep-sea sediments or other anaerobic habitats, where it may contribute to the degradation of organic matter or participate in biogeochemical cycles. This can have implications for nutrient recycling and ecosystem dynamics in anaerobic environments.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusSarcina
SpeciesSarcina sp. DSM 11001
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sarcina sp. DSM 11001
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sarcina sp. DSM 11001 genome assembly, contig: Ga0059085_176,

Gene Summary

Adenine Count

1039283 bp

Thymine Count

999275 bp

Guanine Count

1070951 bp

Cytosine Count

1036771 bp

Genome Length

4151587 bp

Protein-coding Genes

3198 genes

Non-Coding Genes

113 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN04487833_106115Not AvailablePositive1223690 - 122459532695.1
zinc-ribbon domainSAMN04487833_106116Not AvailablePositive1224735 - 122535222575.1
fkbp-type peptidyl-prolyl cis-trans isomerase 2SAMN04487833_106117Not AvailablePositive1225587 - 122647431114.2
hypothetical proteinSAMN04487833_106118Not AvailableNegative1226412 - 122672312013.0
adenine deaminaseSAMN04487833_106119Not AvailablePositive1226920 - 122866564374.8
hemolysin, contains cbs domainsSAMN04487833_106120Not AvailablePositive1228846 - 123028853274.9
hemolysin, contains cbs domainsSAMN04487833_106121Not AvailablePositive1230285 - 123155047199.9
slbb domain-containing proteinSAMN04487833_106122Not AvailablePositive1231934 - 123288434817.0
dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domainSAMN04487833_106123Not AvailablePositive1232947 - 123364826918.6
signal transduction histidine kinaseSAMN04487833_106124Not AvailablePositive1233928 - 123582371768.0

Displaying genes 921 – 930 of 3311 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.