Methylophilus rhizosphaerae strain CBMB127

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Nitrosomonadales

Family

Methylophilaceae

Genus

Methylophilus

Description

Methylophilus rhizosphaerae strain CBMB127 is a Gram-negative, aerobic bacterium characterized by its rod shape. This strain thrives optimally at a temperature of 29°C and falls within the mesophilic temperature range. Notably, M. rhizosphaerae is non-spore-forming and possesses a single replicon, which is significant for its genetic stability and replication process. The strain is cataloged under the accession number FNFX00000000.1, indicating its inclusion in genomic databases for further research and reference. The aerobic nature of Methylophilus rhizosphaerae suggests that it relies on oxygen for its metabolic processes, which is typical for many bacteria that inhabit environments where oxygen is readily available. From a biological and ecological perspective, the traits of M. rhizosphaerae suggest its potential role in soil ecosystems, particularly in the rhizosphere, where it may interact with plant roots. Its ability to thrive in a mesophilic range and utilize aerobic respiration may facilitate nutrient cycling and contribute to the overall health of soil microbiomes. Understanding the characteristics of this strain can provide insights into its functional roles in supporting plant growth and soil fertility, emphasizing the importance of such microorganisms in ecological systems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNitrosomonadales
FamilyMethylophilaceae
GenusMethylophilus
SpeciesMethylophilus rhizosphaerae
Strainstrain CBMB127

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methylophilus rhizosphaerae strain CBMB127 genome assembly,

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2647 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN05192566_1733Not AvailableNegative1773499 - 177383112647.9
trna (5-methylaminomethyl-2-thiouridylate)-methyltransferaseSAMN05192566_1734Not AvailableNegative1773908 - 177500240605.1
nudix domain-containing proteinSAMN05192566_1735Not AvailableNegative1774999 - 177548417987.3
multiple antibiotic resistance proteinSAMN05192566_1736Not AvailableNegative1775585 - 177622322443.2
putative proteaseSAMN05192566_1737Not AvailableNegative1776295 - 177822971867.6
adenosylmethionine-8-amino-7-oxononanoate aminotransferaseSAMN05192566_1738Not AvailablePositive1778316 - 177963248458.8
d-alanyl-d-alanine carboxypeptidase / d-alanyl-d-alanine-endopeptidase (penicillin-binding protein 4)SAMN05192566_1739Not AvailablePositive1779632 - 178104151038.6
fkbp-type peptidyl-prolyl cis-trans isomerase fkpaSAMN05192566_1740Not AvailablePositive1781111 - 178157516514.9
putative redox proteinSAMN05192566_1741Not AvailablePositive1781654 - 178207915308.6
catechol 2,3-dioxygenaseSAMN05192566_1742Not AvailablePositive1782098 - 178252015959.0

Displaying genes 1711 – 1720 of 2692 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.