Methylophilus rhizosphaerae strain CBMB127

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Nitrosomonadales

Family

Methylophilaceae

Genus

Methylophilus

Description

Methylophilus rhizosphaerae strain CBMB127 is a Gram-negative, aerobic bacterium characterized by its rod shape. This strain thrives optimally at a temperature of 29°C and falls within the mesophilic temperature range. Notably, M. rhizosphaerae is non-spore-forming and possesses a single replicon, which is significant for its genetic stability and replication process. The strain is cataloged under the accession number FNFX00000000.1, indicating its inclusion in genomic databases for further research and reference. The aerobic nature of Methylophilus rhizosphaerae suggests that it relies on oxygen for its metabolic processes, which is typical for many bacteria that inhabit environments where oxygen is readily available. From a biological and ecological perspective, the traits of M. rhizosphaerae suggest its potential role in soil ecosystems, particularly in the rhizosphere, where it may interact with plant roots. Its ability to thrive in a mesophilic range and utilize aerobic respiration may facilitate nutrient cycling and contribute to the overall health of soil microbiomes. Understanding the characteristics of this strain can provide insights into its functional roles in supporting plant growth and soil fertility, emphasizing the importance of such microorganisms in ecological systems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNitrosomonadales
FamilyMethylophilaceae
GenusMethylophilus
SpeciesMethylophilus rhizosphaerae
Strainstrain CBMB127

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methylophilus rhizosphaerae strain CBMB127 genome assembly,

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2647 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
kdo2-lipid iv(a) lauroyltransferaseSAMN05192566_1213Not AvailablePositive1249658 - 125054832811.9
gmp synthase-glutamine amidotransferaseSAMN05192566_1214Not AvailableNegative1250552 - 125126525930.1
ribosomal large subunit pseudouridine synthase eSAMN05192566_1215Not AvailableNegative1251278 - 125182620670.1
isocitrate dehydrogenase (nadp)SAMN05192566_1216Not AvailablePositive1251837 - 125307244702.0
cold-shock dna-binding protein familySAMN05192566_1217Not AvailableNegative1253176 - 12533827302.43
type iv pilus assembly protein pilbSAMN05192566_1218Not AvailablePositive1253719 - 125544062714.9
type iv pilus assembly protein pilcSAMN05192566_1219Not AvailablePositive1255467 - 125669044270.0
thiol:disulfide interchange protein dsbcSAMN05192566_1220Not AvailableNegative1256760 - 125753028649.6
ubiquinone biosynthesis hydroxylase, ubih/ubif/visc/coq6 familySAMN05192566_1221Not AvailableNegative1257527 - 125873543847.5
2-octaprenyl-6-methoxyphenol hydroxylaseSAMN05192566_1222Not AvailableNegative1258725 - 125990341929.8

Displaying genes 1201 – 1210 of 2692 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.