Nocardioides sp. YR527

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides sp. YR527 is characterized by its single replicon, indicating a streamlined genomic organization. The organism has been documented in the accession FNFN00000000.1, which provides a basis for further genomic analysis and comparative studies. Nocardioides species are generally known for their role in the degradation of environmental pollutants, particularly in soil ecosystems. They often possess the ability to metabolize complex organic compounds, which can play a significant role in the bioremediation of contaminated sites. The specific traits of Nocardioides sp. YR527 suggest that it may also contribute to ecological processes, particularly in nutrient cycling and organic matter decomposition. The presence of a single replicon in Nocardioides sp. YR527 may reflect adaptations that enhance its survival and efficiency in various environments. This trait can be advantageous in fluctuating ecological conditions, allowing the organism to allocate resources more effectively towards growth and metabolic processes. In summary, Nocardioides sp. YR527, with its single replicon and documented genomic information, exemplifies the potential of microorganisms in environmental management and bioremediation efforts. Its metabolic capabilities may contribute significantly to soil health and the degradation of pollutants, underscoring the importance of studying such microorganisms in ecological and environmental contexts.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyNocardioidaceae
GenusNocardioides
SpeciesNocardioides sp. YR527
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardioides sp. YR527 genome assembly, contig: Ga0115474_122,

Gene Summary

Adenine Count

942076 bp

Thymine Count

944694 bp

Guanine Count

2160135 bp

Cytosine Count

2145537 bp

Genome Length

6192442 bp

Protein-coding Genes

5849 genes

Non-Coding Genes

94 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4,5-dopa dioxygenase extradiolSAMN05428985_1183Not AvailablePositive6146396 - 614730732894.8
mannose or cellobiose epimerase, n-acyl-d-glucosamine 2-epimerase familySAMN05428985_1184Not AvailableNegative6147310 - 614849443004.2
carbohydrate abc transporter membrane protein 2, cut1 familySAMN05428985_1185Not AvailableNegative6148502 - 614937131072.7
carbohydrate abc transporter membrane protein 1, cut1 familySAMN05428985_1186Not AvailableNegative6149368 - 615030635065.0
carbohydrate abc transporter substrate-binding protein, cut1 familySAMN05428985_1187Not AvailableNegative6150406 - 615167744931.6
sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domainSAMN05428985_1188Not AvailablePositive6151847 - 615301940830.1
n-ethylmaleimide reductaseSAMN05428985_1189Not AvailablePositive6153044 - 615413539584.1
alpha-1,2-mannosidase, putativeSAMN05428985_11810Not AvailablePositive6154211 - 615662585715.6
hypothetical proteinSAMN05428985_11811Not AvailablePositive6156665 - 61569139184.7
predicted nucleic acid-binding protein, contains pin domainSAMN05428985_11812Not AvailablePositive6156910 - 615731114469.4

Displaying genes 5901 – 5910 of 5943 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.