Nocardioides sp. YR527

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides sp. YR527 is characterized by its single replicon, indicating a streamlined genomic organization. The organism has been documented in the accession FNFN00000000.1, which provides a basis for further genomic analysis and comparative studies. Nocardioides species are generally known for their role in the degradation of environmental pollutants, particularly in soil ecosystems. They often possess the ability to metabolize complex organic compounds, which can play a significant role in the bioremediation of contaminated sites. The specific traits of Nocardioides sp. YR527 suggest that it may also contribute to ecological processes, particularly in nutrient cycling and organic matter decomposition. The presence of a single replicon in Nocardioides sp. YR527 may reflect adaptations that enhance its survival and efficiency in various environments. This trait can be advantageous in fluctuating ecological conditions, allowing the organism to allocate resources more effectively towards growth and metabolic processes. In summary, Nocardioides sp. YR527, with its single replicon and documented genomic information, exemplifies the potential of microorganisms in environmental management and bioremediation efforts. Its metabolic capabilities may contribute significantly to soil health and the degradation of pollutants, underscoring the importance of studying such microorganisms in ecological and environmental contexts.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyNocardioidaceae
GenusNocardioides
SpeciesNocardioides sp. YR527
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardioides sp. YR527 genome assembly, contig: Ga0115474_122,

Gene Summary

Adenine Count

942076 bp

Thymine Count

944694 bp

Guanine Count

2160135 bp

Cytosine Count

2145537 bp

Genome Length

6192442 bp

Protein-coding Genes

5849 genes

Non-Coding Genes

94 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
b12 binding domain-containing proteinSAMN05428985_10896Not AvailablePositive4883426 - 488432531308.2
zn-dependent dipeptidase, dipeptidase homologSAMN05428985_10897Not AvailableNegative4884322 - 488550042442.2
transcriptional regulator, asnc familySAMN05428985_10898Not AvailablePositive4885636 - 488669437869.6
doxx-like family proteinSAMN05428985_10899Not AvailablePositive4886717 - 488710013215.0
protein of unknown functionSAMN05428985_108100Not AvailablePositive4887829 - 488910346376.4
hypothetical proteinSAMN05428985_108101Not AvailablePositive4889218 - 488978721398.9
metallo-beta-lactamase superfamily proteinSAMN05428985_108102Not AvailablePositive4889936 - 489216181289.3
dna-binding transcriptional regulator, marr familySAMN05428985_108103Not AvailableNegative4892172 - 489262116635.7
hypothetical proteinSAMN05428985_108104Not AvailablePositive4892682 - 489326621037.1
enoyl-coa hydratase/carnithine racemaseSAMN05428985_108105Not AvailableNegative4893283 - 489405326954.5

Displaying genes 4721 – 4730 of 5943 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.