Nocardioides sp. YR527

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides sp. YR527 is characterized by its single replicon, indicating a streamlined genomic organization. The organism has been documented in the accession FNFN00000000.1, which provides a basis for further genomic analysis and comparative studies. Nocardioides species are generally known for their role in the degradation of environmental pollutants, particularly in soil ecosystems. They often possess the ability to metabolize complex organic compounds, which can play a significant role in the bioremediation of contaminated sites. The specific traits of Nocardioides sp. YR527 suggest that it may also contribute to ecological processes, particularly in nutrient cycling and organic matter decomposition. The presence of a single replicon in Nocardioides sp. YR527 may reflect adaptations that enhance its survival and efficiency in various environments. This trait can be advantageous in fluctuating ecological conditions, allowing the organism to allocate resources more effectively towards growth and metabolic processes. In summary, Nocardioides sp. YR527, with its single replicon and documented genomic information, exemplifies the potential of microorganisms in environmental management and bioremediation efforts. Its metabolic capabilities may contribute significantly to soil health and the degradation of pollutants, underscoring the importance of studying such microorganisms in ecological and environmental contexts.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyNocardioidaceae
GenusNocardioides
SpeciesNocardioides sp. YR527
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardioides sp. YR527 genome assembly, contig: Ga0115474_122,

Gene Summary

Adenine Count

942076 bp

Thymine Count

944694 bp

Guanine Count

2160135 bp

Cytosine Count

2145537 bp

Genome Length

6192442 bp

Protein-coding Genes

5849 genes

Non-Coding Genes

94 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna polymerase sigma-70 factor, sigma-e familySAMN05428985_101398Not AvailableNegative415659 - 41617419007.4
dna ligase dSAMN05428985_101399Not AvailablePositive416278 - 41724636309.6
peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domainsSAMN05428985_101400Not AvailableNegative417250 - 41946980812.2
putative recb family exonucleaseSAMN05428985_101401Not AvailableNegative419557 - 42047733778.0
zn-dependent protease (includes spoivfb)SAMN05428985_101402Not AvailablePositive420525 - 42172141619.9
trna (adenine-58-n(1)-) methyltransferaseSAMN05428985_101403Not AvailablePositive421815 - 42275634219.7
proteasome-associated atpaseSAMN05428985_101404Not AvailablePositive422906 - 42466965222.5
uncharacterized membrane-anchored proteinSAMN05428985_101405Not AvailableNegative424734 - 42519516671.8
uncharacterized membrane proteinSAMN05428985_101406Not AvailableNegative425192 - 42636141041.4
hypothetical proteinSAMN05428985_101407Not AvailablePositive426532 - 4267386955.58

Displaying genes 461 – 470 of 5943 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.