Nocardioides sp. YR527

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides sp. YR527 is characterized by its single replicon, indicating a streamlined genomic organization. The organism has been documented in the accession FNFN00000000.1, which provides a basis for further genomic analysis and comparative studies. Nocardioides species are generally known for their role in the degradation of environmental pollutants, particularly in soil ecosystems. They often possess the ability to metabolize complex organic compounds, which can play a significant role in the bioremediation of contaminated sites. The specific traits of Nocardioides sp. YR527 suggest that it may also contribute to ecological processes, particularly in nutrient cycling and organic matter decomposition. The presence of a single replicon in Nocardioides sp. YR527 may reflect adaptations that enhance its survival and efficiency in various environments. This trait can be advantageous in fluctuating ecological conditions, allowing the organism to allocate resources more effectively towards growth and metabolic processes. In summary, Nocardioides sp. YR527, with its single replicon and documented genomic information, exemplifies the potential of microorganisms in environmental management and bioremediation efforts. Its metabolic capabilities may contribute significantly to soil health and the degradation of pollutants, underscoring the importance of studying such microorganisms in ecological and environmental contexts.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyNocardioidaceae
GenusNocardioides
SpeciesNocardioides sp. YR527
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardioides sp. YR527 genome assembly, contig: Ga0115474_122,

Gene Summary

Adenine Count

942076 bp

Thymine Count

944694 bp

Guanine Count

2160135 bp

Cytosine Count

2145537 bp

Genome Length

6192442 bp

Protein-coding Genes

5849 genes

Non-Coding Genes

94 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN05428985_107205Not AvailableNegative4665357 - 466580916007.9
iclr helix-turn-helix domain-containing proteinSAMN05428985_107206Not AvailableNegative4665769 - 466640722903.5
transcription-repair coupling factorSAMN05428985_107207Not AvailableNegative4666426 - 4670007131681.0
predicted oxidoreductaseSAMN05428985_107208Not AvailablePositive4670127 - 467113736823.2
dna-binding transcriptional regulator, merr familySAMN05428985_107209Not AvailableNegative4671094 - 467153716318.3
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN05428985_107210Not AvailableNegative4671581 - 467235126289.2
transcriptional regulator, tetr familySAMN05428985_107211Not AvailablePositive4672413 - 467300621020.0
d-alanyl-d-alanine carboxypeptidaseSAMN05428985_107212Not AvailablePositive4673003 - 467389931801.5
nadph-dependent ferric siderophore reductase, contains fad-binding and sip domainsSAMN05428985_107213Not AvailableNegative4674053 - 467483828272.1
protein-tyrosine phosphataseSAMN05428985_107214Not AvailableNegative4674888 - 467559225005.0

Displaying genes 4521 – 4530 of 5943 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.