Nocardioides sp. YR527

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides sp. YR527 is characterized by its single replicon, indicating a streamlined genomic organization. The organism has been documented in the accession FNFN00000000.1, which provides a basis for further genomic analysis and comparative studies. Nocardioides species are generally known for their role in the degradation of environmental pollutants, particularly in soil ecosystems. They often possess the ability to metabolize complex organic compounds, which can play a significant role in the bioremediation of contaminated sites. The specific traits of Nocardioides sp. YR527 suggest that it may also contribute to ecological processes, particularly in nutrient cycling and organic matter decomposition. The presence of a single replicon in Nocardioides sp. YR527 may reflect adaptations that enhance its survival and efficiency in various environments. This trait can be advantageous in fluctuating ecological conditions, allowing the organism to allocate resources more effectively towards growth and metabolic processes. In summary, Nocardioides sp. YR527, with its single replicon and documented genomic information, exemplifies the potential of microorganisms in environmental management and bioremediation efforts. Its metabolic capabilities may contribute significantly to soil health and the degradation of pollutants, underscoring the importance of studying such microorganisms in ecological and environmental contexts.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyNocardioidaceae
GenusNocardioides
SpeciesNocardioides sp. YR527
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardioides sp. YR527 genome assembly, contig: Ga0115474_122,

Gene Summary

Adenine Count

942076 bp

Thymine Count

944694 bp

Guanine Count

2160135 bp

Cytosine Count

2145537 bp

Genome Length

6192442 bp

Protein-coding Genes

5849 genes

Non-Coding Genes

94 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein n-acetyltransferase, rimj/riml familySAMN05428985_101106Not AvailableNegative118781 - 11937122217.5
dna helicase ivSAMN05428985_101107Not AvailableNegative119368 - 12142573814.9
hypothetical proteinSAMN05428985_101108Not AvailableNegative121433 - 1216036392.84
hypothetical proteinSAMN05428985_101109Not AvailablePositive121644 - 12191910542.4
lipooligosaccharide transport system atp-binding proteinSAMN05428985_101110Not AvailablePositive121951 - 12286533545.6
lipooligosaccharide transport system permease proteinSAMN05428985_101111Not AvailablePositive122865 - 12369529854.2
lipooligosaccharide transport system permease proteinSAMN05428985_101112Not AvailablePositive123697 - 12450929968.5
dinb superfamily proteinSAMN05428985_101113Not AvailablePositive124582 - 12573042460.4
protein of unknown functionSAMN05428985_101114Not AvailablePositive125746 - 1259407303.65
predicted arabinose efflux permease, mfs familySAMN05428985_101115Not AvailablePositive125937 - 12717540835.8

Displaying genes 171 – 180 of 5943 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.