Natronorubrum texcoconense strain B4

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Natronorubrum

Description

Natronorubrum texcoconense strain B4 is characterized by having a single replicon, which is significant in microbial genetics as it suggests a streamlined genomic organization. This trait can influence the organism's replicative and evolutionary strategies. The strain is cataloged under the accession number FNFE00000000.1, which provides a reference point for researchers seeking genetic and genomic information about this specific bacterium. The presence of only one replicon may affect its adaptability to extreme environments, as Natronorubrum species are commonly associated with hypersaline and alkaline conditions. This trait could indicate a genetic simplicity that may allow for efficient replication and survival in such challenging habitats. Overall, the genomic structure of Natronorubrum texcoconense strain B4, specifically its single replicon, may provide insights into its ecological niche and evolutionary adaptations. Understanding these traits can contribute to our knowledge of extremophiles and their role in biogeochemical cycles in saline environments.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusNatronorubrum
SpeciesNatronorubrum texcoconense
Strainstrain B4

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Natronorubrum texcoconense strain B4,CECT 8067,JCM 17497 genome

Gene Summary

Adenine Count

849005 bp

Thymine Count

842804 bp

Guanine Count

1474017 bp

Cytosine Count

1475967 bp

Genome Length

4641793 bp

Protein-coding Genes

4471 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN04515672_0819Not AvailablePositive647694 - 64797510542.3
methyltransferase domain-containing proteinSAMN04515672_0820Not AvailableNegative648083 - 64890430328.0
predicted component of the ribosome quality control (rqc) complex, yloa/tae2 family, contains fibronectin-binding (fbpa) and duf814 domainsSAMN04515672_0821Not AvailableNegative649178 - 65135581471.0
hypothetical proteinSAMN04515672_0822Not AvailablePositive651554 - 65219223771.4
nucleoside 2-deoxyribosyltransferaseSAMN04515672_0823Not AvailableNegative652261 - 65268315402.8
thiaminase (transcriptional activator tena)SAMN04515672_0824Not AvailableNegative652862 - 65363828706.6
thiaminase /4-amino-5-aminomethyl-2-methylpyrimidine deaminaseSAMN04515672_0825Not AvailableNegative653626 - 65428525336.5
elongator complex protein 3SAMN04515672_0826Not AvailableNegative654841 - 65656265256.3
hypothetical proteinSAMN04515672_0827Not AvailablePositive656680 - 65711416006.3
uncharacterized conserved proteinSAMN04515672_0828Not AvailableNegative657157 - 65764817251.7

Displaying genes 621 – 630 of 4517 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.