Lutimaribacter saemankumensis strain DSM 28010

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Lutimaribacter

Description

Lutimaribacter saemankumensis strain DSM 28010 is a Gram-negative, non-motile, rod-shaped bacterium. This organism is classified as mesophilic, with an optimal growth temperature of 29°C. It possesses a single replicon, which is indicative of its genomic structure. The strain is represented in sequence databases under the accession number FNEB00000000.1. The classification of Lutimaribacter saemankumensis within the microbial community highlights its potential ecological role, particularly in environments where mesophilic conditions prevail. The non-motility of this bacterium suggests that it may rely on passive dispersion mechanisms or interactions with other organisms for colonization and nutrient acquisition. Understanding the specific habitat and interactions of Lutimaribacter saemankumensis can provide insights into its ecological niche and its contributions to biogeochemical cycles in its native environment. Overall, the traits of Lutimaribacter saemankumensis strain DSM 28010 suggest a specialized adaptation to mesophilic conditions, which may play a role in its survival and functionality in specific ecological contexts. Further investigation into its metabolic capabilities and interactions with other microorganisms could reveal its importance in microbial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusLutimaribacter
SpeciesLutimaribacter saemankumensis
Strainstrain DSM 28010

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lutimaribacter saemankumensis strain DSM 28010 genome assembly,

Gene Summary

Adenine Count

700190 bp

Thymine Count

700526 bp

Guanine Count

1185158 bp

Cytosine Count

1186639 bp

Genome Length

3772513 bp

Protein-coding Genes

3749 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
site-specific recombinase xerdSAMN05421850_105264Not AvailableNegative2351998 - 235311942843.2
integrase core domain-containing proteinSAMN05421850_105265Not AvailableNegative2353275 - 235359512106.3
outer membrane autotransporter barrel domain-containing proteinSAMN05421850_1061Not AvailablePositive2353764 - 235451326066.3
dna-binding transcriptional regulator, lysr familySAMN05421850_1062Not AvailableNegative2354617 - 235552834004.3
trap-type c4-dicarboxylate transport system, small permease componentSAMN05421850_1063Not AvailablePositive2355625 - 235609517735.9
trap transporter, dctm subunitSAMN05421850_1064Not AvailablePositive2356092 - 235739046063.9
trap-type c4-dicarboxylate transport system, substrate-binding proteinSAMN05421850_1065Not AvailablePositive2357443 - 235843835239.7
glycine/d-amino acid oxidaseSAMN05421850_1066Not AvailablePositive2358497 - 235959139170.9
2fe-2s iron-sulfur cluster binding domain-containing proteinSAMN05421850_1067Not AvailablePositive2359572 - 235987710584.9
nadph-dependent 2,4-dienoyl-coa reductase, sulfur reductaseSAMN05421850_1068Not AvailablePositive2359864 - 236125548446.8

Displaying genes 2371 – 2380 of 3811 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.