Lutimaribacter saemankumensis strain DSM 28010

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Lutimaribacter

Description

Lutimaribacter saemankumensis strain DSM 28010 is a Gram-negative, non-motile, rod-shaped bacterium. This organism is classified as mesophilic, with an optimal growth temperature of 29°C. It possesses a single replicon, which is indicative of its genomic structure. The strain is represented in sequence databases under the accession number FNEB00000000.1. The classification of Lutimaribacter saemankumensis within the microbial community highlights its potential ecological role, particularly in environments where mesophilic conditions prevail. The non-motility of this bacterium suggests that it may rely on passive dispersion mechanisms or interactions with other organisms for colonization and nutrient acquisition. Understanding the specific habitat and interactions of Lutimaribacter saemankumensis can provide insights into its ecological niche and its contributions to biogeochemical cycles in its native environment. Overall, the traits of Lutimaribacter saemankumensis strain DSM 28010 suggest a specialized adaptation to mesophilic conditions, which may play a role in its survival and functionality in specific ecological contexts. Further investigation into its metabolic capabilities and interactions with other microorganisms could reveal its importance in microbial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusLutimaribacter
SpeciesLutimaribacter saemankumensis
Strainstrain DSM 28010

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lutimaribacter saemankumensis strain DSM 28010 genome assembly,

Gene Summary

Adenine Count

700190 bp

Thymine Count

700526 bp

Guanine Count

1185158 bp

Cytosine Count

1186639 bp

Genome Length

3772513 bp

Protein-coding Genes

3749 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hydroxymethylglutaryl-coa reductaseSAMN05421850_10189Not AvailableNegative92812 - 9413145843.2
biotin/methionine sulfoxide reductaseSAMN05421850_10190Not AvailableNegative94198 - 9645682482.1
peptide/nickel transport system substrate-binding proteinSAMN05421850_10191Not AvailablePositive96686 - 9826357431.4
peptide/nickel transport system permease proteinSAMN05421850_10192Not AvailablePositive98351 - 9933436490.0
peptide/nickel transport system permease proteinSAMN05421850_10193Not AvailablePositive99336 - 10027734035.5
peptide/nickel transport system atp-binding proteinSAMN05421850_10194Not AvailablePositive100274 - 10126935621.3
peptide/nickel transport system atp-binding proteinSAMN05421850_10195Not AvailablePositive101266 - 10223135239.4
selenocysteine lyase/cysteine desulfuraseSAMN05421850_10196Not AvailableNegative102248 - 10350143943.3
hypothetical proteinSAMN05421850_10197Not AvailablePositive103668 - 1038476248.43
23s rrna um-2552 2'-o-methyltransferaseSAMN05421850_10198Not AvailableNegative103868 - 10458425826.2

Displaying genes 111 – 120 of 3811 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.