Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | strain CGMCC 1.5058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
877739 bp
Thymine Count
893774 bp
Guanine Count
664573 bp
Cytosine Count
679392 bp
Genome Length
3119379 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophanase | SAMN05421804_1028 | Not Available | Positive | 993455 - 994837 | 51347.7 |
| hypothetical protein | SAMN05421804_1029 | Not Available | Positive | 995003 - 995869 | 32243.6 |
| virulence factor | SAMN05421804_10210 | Not Available | Negative | 996287 - 997207 | 34759.0 |
| putative abc transport system atp-binding protein | SAMN05421804_10211 | Not Available | Positive | 997505 - 998206 | 25714.0 |
| putative abc transport system permease protein | SAMN05421804_10212 | Not Available | Positive | 998206 - 1001703 | 131163.0 |
| dna-binding transcriptional regulator, acrr family | SAMN05421804_10213 | Not Available | Positive | 1001715 - 1002299 | 22033.1 |
| lactocepin | SAMN05421804_10214 | Not Available | Negative | 1002408 - 1006244 | 138999.0 |
| pp_00941 | SAMN05421804_10215 | Not Available | Negative | 1006593 - 1007666 | Not Available |
| 23s rrna (guanine745-n1)-methyltransferase | SAMN05421804_10216 | Not Available | Positive | 1008034 - 1008912 | 32986.1 |
| topoisomerase-4 subunit b | SAMN05421804_10217 | Not Available | Positive | 1008909 - 1010849 | 73380.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
