Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | strain CGMCC 1.5058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
877739 bp
Thymine Count
893774 bp
Guanine Count
664573 bp
Cytosine Count
679392 bp
Genome Length
3119379 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421804_101856 | Not Available | Negative | 900282 - 900737 | 17849.9 |
| uncharacterized conserved protein ydhg, yjbr/cyay-like superfamily, duf1801 family | SAMN05421804_101857 | Not Available | Negative | 900810 - 901217 | 15979.2 |
| transcriptional antiterminator | SAMN05421804_101858 | Not Available | Positive | 901424 - 902869 | 56353.1 |
| sigma factor regulator c-terminal | SAMN05421804_101859 | Not Available | Negative | 902917 - 904098 | 45122.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421804_101860 | Not Available | Negative | 904082 - 904501 | 16620.5 |
| hypothetical protein | SAMN05421804_101861 | Not Available | Negative | 904550 - 904825 | 10692.6 |
| methyl-accepting chemotaxis protein | SAMN05421804_101862 | Not Available | Negative | 904957 - 906960 | 72027.7 |
| putative gtp pyrophosphokinase | SAMN05421804_101863 | Not Available | Negative | 907306 - 908004 | 27309.4 |
| shikimate kinase | SAMN05421804_101864 | Not Available | Negative | 908109 - 908612 | 19190.3 |
| dihydrofolate reductase | SAMN05421804_101865 | Not Available | Negative | 908646 - 909218 | 21796.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
