Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | strain CGMCC 1.5058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
877739 bp
Thymine Count
893774 bp
Guanine Count
664573 bp
Cytosine Count
679392 bp
Genome Length
3119379 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted o-methyltransferase yrrm | SAMN05421804_10155 | Not Available | Negative | 59035 - 59706 | 25222.6 |
| 5-formyltetrahydrofolate cyclo-ligase | SAMN05421804_10156 | Not Available | Negative | 59796 - 60377 | 22002.8 |
| upf0755 protein | SAMN05421804_10157 | Not Available | Negative | 60459 - 61481 | 38774.4 |
| gtp-binding protein | SAMN05421804_10158 | Not Available | Negative | 61512 - 63329 | 67425.2 |
| cell fate regulator ylbf, yhea/ymca/duf963 family (controls sporulation, competence, biofilm development) | SAMN05421804_10159 | Not Available | Negative | 63490 - 63837 | 13024.6 |
| 16s ribosomal rna . bacterial ssu | Not Available | Not Available | Positive | 65119 - 65208 | 18.01 |
| ribonuclease j | SAMN05421804_10160 | Not Available | Negative | 63852 - 65519 | 61588.4 |
| fur family transcriptional regulator, ferric uptake regulator | SAMN05421804_10161 | Not Available | Negative | 65500 - 65997 | 19297.2 |
| protein of unknown function | SAMN05421804_10162 | Not Available | Negative | 65999 - 66268 | 10205.5 |
| putative holliday junction resolvase | SAMN05421804_10163 | Not Available | Negative | 66286 - 66708 | 15693.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
