Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | strain CGMCC 1.5058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
877739 bp
Thymine Count
893774 bp
Guanine Count
664573 bp
Cytosine Count
679392 bp
Genome Length
3119379 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane-anchored protein yitt, contains duf161 and duf2179 domains | SAMN05421804_10145 | Not Available | Negative | 46932 - 47804 | 31536.5 |
| atpase components of abc transporters with duplicated atpase domains | SAMN05421804_10146 | Not Available | Negative | 47975 - 49570 | 60214.8 |
| nadh-quinone oxidoreductase subunit e/nadp-reducing hydrogenase subunit hnda | SAMN05421804_10147 | Not Available | Positive | 49828 - 50340 | 19348.2 |
| nadh-quinone oxidoreductase subunit f/nadp-reducing hydrogenase subunit hndc | SAMN05421804_10148 | Not Available | Positive | 50333 - 52195 | 67680.0 |
| nadh-quinone oxidoreductase subunit g/nadp-reducing hydrogenase subunit hndd | SAMN05421804_10149 | Not Available | Positive | 52199 - 53962 | 64892.1 |
| flavorubredoxin | SAMN05421804_10150 | Not Available | Positive | 54114 - 55322 | 45385.4 |
| twitching motility protein pilt | SAMN05421804_10151 | Not Available | Negative | 55345 - 56319 | 36332.1 |
| shikimate dehydrogenase | SAMN05421804_10152 | Not Available | Negative | 56292 - 57053 | 28983.0 |
| uridine kinase | SAMN05421804_10153 | Not Available | Negative | 57142 - 57819 | 26039.4 |
| putative protease | SAMN05421804_10154 | Not Available | Negative | 57816 - 59042 | 46388.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
