Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | strain CGMCC 1.5058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
877739 bp
Thymine Count
893774 bp
Guanine Count
664573 bp
Cytosine Count
679392 bp
Genome Length
3119379 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transketolase | SAMN05421804_101515 | Not Available | Negative | 548684 - 550681 | 72647.2 |
| hypothetical protein | SAMN05421804_101516 | Not Available | Negative | 550740 - 551429 | 26650.0 |
| tyrosyl-trna synthetase | SAMN05421804_101517 | Not Available | Negative | 551429 - 552649 | 46300.9 |
| nad(p)h-binding | SAMN05421804_101518 | Not Available | Negative | 552994 - 553437 | 16350.0 |
| hypothetical protein | SAMN05421804_101519 | Not Available | Negative | 553688 - 554104 | 15585.5 |
| probable zinc-ribbon domain-containing protein | SAMN05421804_101520 | Not Available | Positive | 554458 - 554619 | 6420.6 |
| tryptophanyl-trna synthetase | SAMN05421804_101521 | Not Available | Positive | 554762 - 555775 | 38178.2 |
| acetyltransferase (gnat) domain-containing protein | SAMN05421804_101522 | Not Available | Positive | 555793 - 556188 | 15147.3 |
| pts system, n-acetylglucosamine-specific iic component | SAMN05421804_101523 | Not Available | Negative | 556254 - 557717 | 54011.7 |
| beta-glucoside operon transcriptional antiterminator | SAMN05421804_101524 | Not Available | Negative | 557714 - 558547 | 31976.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
