Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | strain CGMCC 1.5058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
877739 bp
Thymine Count
893774 bp
Guanine Count
664573 bp
Cytosine Count
679392 bp
Genome Length
3119379 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate carbamoyltransferase regulatory subunit | SAMN05421804_101465 | Not Available | Negative | 494562 - 494984 | 16062.0 |
| aspartate carbamoyltransferase catalytic subunit | SAMN05421804_101466 | Not Available | Negative | 494981 - 495907 | 35234.9 |
| thioredoxin reductase (nadph) | SAMN05421804_101467 | Not Available | Negative | 496251 - 497177 | 33238.9 |
| edd domain protein, degv family | SAMN05421804_101468 | Not Available | Negative | 497353 - 498189 | 30210.8 |
| tryptophan transporter trpp | SAMN05421804_101469 | Not Available | Negative | 498304 - 498822 | 18331.4 |
| simple sugar transport system permease protein | SAMN05421804_101470 | Not Available | Negative | 499288 - 500253 | 34847.6 |
| simple sugar transport system permease protein | SAMN05421804_101471 | Not Available | Negative | 500253 - 501431 | 41987.1 |
| simple sugar transport system atp-binding protein | SAMN05421804_101472 | Not Available | Negative | 501421 - 502968 | 57227.6 |
| basic membrane protein a | SAMN05421804_101473 | Not Available | Negative | 503091 - 504245 | 40436.8 |
| trna (cytidine/uridine-2'-o-)-methyltransferase | SAMN05421804_101474 | Not Available | Negative | 504491 - 504955 | 17542.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
