Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | strain CGMCC 1.5058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
877739 bp
Thymine Count
893774 bp
Guanine Count
664573 bp
Cytosine Count
679392 bp
Genome Length
3119379 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide/nickel transport system atp-binding protein/oligopeptide transport system atp-binding protein | SAMN05421804_101293 | Not Available | Negative | 306328 - 307311 | 36599.8 |
| peptide/nickel transport system permease protein | SAMN05421804_101294 | Not Available | Negative | 307320 - 308231 | 33735.0 |
| peptide/nickel transport system permease protein | SAMN05421804_101295 | Not Available | Negative | 308243 - 309220 | 36301.6 |
| peptide/nickel transport system substrate-binding protein | SAMN05421804_101296 | Not Available | Negative | 309311 - 311059 | 64603.4 |
| uncharacterized membrane protein ysda, duf1294 family | SAMN05421804_101297 | Not Available | Positive | 311763 - 312032 | 10414.3 |
| pyruvate, orthophosphate dikinase | SAMN05421804_101298 | Not Available | Negative | 312595 - 315225 | 97479.7 |
| hypothetical protein | SAMN05421804_101299 | Not Available | Negative | 315519 - 316067 | 20836.1 |
| dna repair protein reco (recombination protein o) | SAMN05421804_101300 | Not Available | Negative | 316088 - 316732 | 24887.4 |
| gtp-binding protein era | SAMN05421804_101301 | Not Available | Negative | 316732 - 317616 | 33147.5 |
| cytidine deaminase | SAMN05421804_101302 | Not Available | Negative | 317609 - 318028 | 15422.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
