Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | strain CGMCC 1.5058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
877739 bp
Thymine Count
893774 bp
Guanine Count
664573 bp
Cytosine Count
679392 bp
Genome Length
3119379 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdpi/yhfl protein family protein | SAMN05421804_1188 | Not Available | Positive | 3094280 - 3094651 | 14095.5 |
| hypothetical protein | SAMN05421804_1189 | Not Available | Negative | 3094683 - 3095717 | 34899.3 |
| predicted component of the ribosome quality control (rqc) complex, yloa/tae2 family, contains fibronectin-binding (fbpa) and duf814 domains | SAMN05421804_11810 | Not Available | Negative | 3095734 - 3097407 | 63754.6 |
| general secretion pathway protein e/type iv pilus assembly protein pilb | SAMN05421804_11811 | Not Available | Positive | 3097590 - 3098465 | 33388.5 |
| type ii secretory pathway, component pulf | SAMN05421804_11812 | Not Available | Positive | 3098404 - 3099378 | 37555.6 |
| hypothetical protein | SAMN05421804_11813 | Not Available | Positive | 3099365 - 3099814 | 16502.1 |
| hypothetical protein | SAMN05421804_11814 | Not Available | Positive | 3099988 - 3100287 | 11421.0 |
| hypothetical protein | SAMN05421804_1191 | Not Available | Negative | 3100288 - 3100428 | 5580.18 |
| hypothetical protein | SAMN05421804_1192 | Not Available | Negative | 3100428 - 3100592 | 6635.76 |
| protein of unknown function | SAMN05421804_1193 | Not Available | Negative | 3100592 - 3102442 | 70114.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
