Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | strain CGMCC 1.5058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
877739 bp
Thymine Count
893774 bp
Guanine Count
664573 bp
Cytosine Count
679392 bp
Genome Length
3119379 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crispr-associated protein cas2 | SAMN05421804_11611 | Not Available | Negative | 3061375 - 3061665 | 10957.3 |
| crisp-associated protein cas1 | SAMN05421804_11612 | Not Available | Negative | 3061669 - 3062700 | 39505.7 |
| crispr-associated exonuclease cas4 | SAMN05421804_11613 | Not Available | Negative | 3062697 - 3063362 | 25807.9 |
| crispr-associated protein csd2 | SAMN05421804_11614 | Not Available | Negative | 3063362 - 3064210 | 31268.8 |
| crispr-associated protein csd1 | SAMN05421804_11615 | Not Available | Negative | 3064210 - 3066081 | 72232.3 |
| crispr-associated protein cas5d | SAMN05421804_11616 | Not Available | Negative | 3066078 - 3066797 | 28311.6 |
| crispr-associated endonuclease/helicase cas3 | SAMN05421804_11617 | Not Available | Negative | 3066808 - 3069210 | 90829.9 |
| hypothetical protein | SAMN05421804_11618 | Not Available | Negative | 3069675 - 3069833 | 6054.6 |
| elongation factor tu | SAMN05421804_1171 | Not Available | Negative | 3070369 - 3070446 | 2859.47 |
| elongation factor g | SAMN05421804_1172 | Not Available | Negative | 3070474 - 3072540 | 75519.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
