Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | strain CGMCC 1.5058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
877739 bp
Thymine Count
893774 bp
Guanine Count
664573 bp
Cytosine Count
679392 bp
Genome Length
3119379 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligopeptide transport system atp-binding protein | SAMN05421804_11217 | Not Available | Negative | 2923035 - 2924096 | 39523.4 |
| oligopeptide transport system permease protein | SAMN05421804_11218 | Not Available | Negative | 2924124 - 2925179 | 39258.4 |
| oligopeptide transport system permease protein | SAMN05421804_11219 | Not Available | Negative | 2925172 - 2926113 | 34678.9 |
| oligopeptide transport system substrate-binding protein | SAMN05421804_11220 | Not Available | Negative | 2926230 - 2927891 | 60427.2 |
| putative abc transport system permease protein | SAMN05421804_11221 | Not Available | Negative | 2928655 - 2930670 | 75407.4 |
| putative abc transport system atp-binding protein | SAMN05421804_11222 | Not Available | Negative | 2930660 - 2931427 | 28532.5 |
| hypothetical protein | SAMN05421804_11223 | Not Available | Negative | 2931437 - 2931847 | 15536.6 |
| hypothetical protein | SAMN05421804_11224 | Not Available | Negative | 2932019 - 2933032 | 39641.6 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05421804_11225 | Not Available | Negative | 2933029 - 2933700 | 25967.7 |
| l-lactate dehydrogenase | SAMN05421804_11226 | Not Available | Positive | 2934181 - 2935134 | 34065.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
