Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | strain CGMCC 1.5058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
877739 bp
Thymine Count
893774 bp
Guanine Count
664573 bp
Cytosine Count
679392 bp
Genome Length
3119379 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine dehydrogenase subunit 1 | SAMN05421804_101252 | Not Available | Negative | 255804 - 257144 | 49594.9 |
| glycine cleavage system h protein | SAMN05421804_101253 | Not Available | Negative | 257148 - 257534 | 14406.7 |
| aminomethyltransferase | SAMN05421804_101254 | Not Available | Negative | 257589 - 258671 | 40609.0 |
| 2-oxoglutarate ferredoxin oxidoreductase subunit alpha | SAMN05421804_101255 | Not Available | Positive | 259251 - 260933 | 62003.6 |
| 2-oxoglutarate ferredoxin oxidoreductase subunit beta | SAMN05421804_101256 | Not Available | Positive | 260930 - 261787 | 31377.4 |
| iron complex transport system substrate-binding protein | SAMN05421804_101257 | Not Available | Negative | 262060 - 263049 | 35782.5 |
| iron complex transport system atp-binding protein | SAMN05421804_101258 | Not Available | Negative | 263091 - 263912 | 30938.5 |
| iron complex transport system permease protein | SAMN05421804_101259 | Not Available | Negative | 263909 - 264853 | 34140.5 |
| iron complex transport system permease protein | SAMN05421804_101260 | Not Available | Negative | 264855 - 265802 | 34183.8 |
| helix-turn-helix domain-containing protein | SAMN05421804_101261 | Not Available | Positive | 265980 - 266705 | 27898.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
