Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | strain CGMCC 1.5058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
877739 bp
Thymine Count
893774 bp
Guanine Count
664573 bp
Cytosine Count
679392 bp
Genome Length
3119379 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isocitrate dehydrogenase (nad+) | SAMN05421804_11018 | Not Available | Negative | 2817368 - 2818549 | 44072.4 |
| dna-binding transcriptional regulator, lysr family | SAMN05421804_11019 | Not Available | Negative | 2818681 - 2819595 | 34979.9 |
| aconitate hydratase | SAMN05421804_11020 | Not Available | Positive | 2819768 - 2821720 | 70659.1 |
| aconitate hydratase | SAMN05421804_11021 | Not Available | Positive | 2821717 - 2823987 | 82605.3 |
| dutp pyrophosphatase | SAMN05421804_11022 | Not Available | Negative | 2824070 - 2824699 | 23395.2 |
| hypothetical protein | SAMN05421804_11023 | Not Available | Positive | 2824821 - 2825300 | 18732.5 |
| predicted dehydrogenase | SAMN05421804_11024 | Not Available | Positive | 2825290 - 2826282 | 37596.4 |
| hypothetical protein | SAMN05421804_11025 | Not Available | Negative | 2826472 - 2826894 | 16840.1 |
| glutathione peroxidase | SAMN05421804_11026 | Not Available | Negative | 2826918 - 2827391 | 17898.4 |
| glutathione peroxidase | SAMN05421804_11027 | Not Available | Negative | 2827522 - 2827995 | 17918.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
