Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | strain CGMCC 1.5058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
877739 bp
Thymine Count
893774 bp
Guanine Count
664573 bp
Cytosine Count
679392 bp
Genome Length
3119379 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein ygbk, duf1537 family | SAMN05421804_10931 | Not Available | Positive | 2753755 - 2754993 | 45735.0 |
| predicted neuraminidase (sialidase) | SAMN05421804_10932 | Not Available | Positive | 2755016 - 2756179 | 43184.7 |
| alcohol dehydrogenase, class iv | SAMN05421804_10933 | Not Available | Positive | 2756238 - 2757401 | 41881.7 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN05421804_10934 | Not Available | Positive | 2757431 - 2758339 | 33252.1 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | SAMN05421804_10935 | Not Available | Positive | 2758341 - 2759432 | 39540.6 |
| di-and tricarboxylate transporter | SAMN05421804_10936 | Not Available | Positive | 2759514 - 2760794 | 45363.5 |
| 2-dehydro-3-deoxyphosphogluconate aldolase / (4s)-4-hydroxy-2-oxoglutarate aldolase | SAMN05421804_10937 | Not Available | Positive | 2760900 - 2761247 | 12967.5 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05421804_10938 | Not Available | Positive | 2761744 - 2763414 | 63096.3 |
| predicted rna-binding protein involved in translation, contains zn-ribbon domain, duf1610 family | SAMN05421804_10939 | Not Available | Negative | 2763526 - 2764422 | 33324.2 |
| hypothetical protein | SAMN05421804_10940 | Not Available | Negative | 2764450 - 2764755 | 11323.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
