Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | strain CGMCC 1.5058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
877739 bp
Thymine Count
893774 bp
Guanine Count
664573 bp
Cytosine Count
679392 bp
Genome Length
3119379 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421804_101234 | Not Available | Positive | 234138 - 234878 | 28663.6 |
| oxygen-independent coproporphyrinogen-3 oxidase | SAMN05421804_101235 | Not Available | Negative | 234909 - 236039 | 43963.5 |
| gtp-binding protein lepa | SAMN05421804_101236 | Not Available | Negative | 236048 - 237850 | 66852.6 |
| small subunit ribosomal protein s20 | SAMN05421804_101237 | Not Available | Positive | 238266 - 238529 | 9488.97 |
| dna polymerase iii, delta subunit | SAMN05421804_101238 | Not Available | Negative | 238602 - 239648 | 40415.1 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 239859 - 239976 | 18.01 |
| 23s ribosomal rna . bacterial lsu | Not Available | Not Available | Positive | 240050 - 240393 | 18.01 |
| comec/rec2-related protein | SAMN05421804_101239 | Not Available | Negative | 239648 - 241258 | 61643.0 |
| rna polymerase sigma factor, sigma-70 family | SAMN05421804_101240 | Not Available | Negative | 241246 - 241872 | 24812.8 |
| septal ring factor envc, activator of murein hydrolases amia and amib | SAMN05421804_101241 | Not Available | Negative | 242283 - 243626 | 50035.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
