Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | strain CGMCC 1.5058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
877739 bp
Thymine Count
893774 bp
Guanine Count
664573 bp
Cytosine Count
679392 bp
Genome Length
3119379 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hamp domain-containing protein | SAMN05421804_10795 | Not Available | Negative | 2600808 - 2601869 | 40024.0 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05421804_10796 | Not Available | Negative | 2601862 - 2602539 | 25716.4 |
| putative abc transport system permease protein | SAMN05421804_10797 | Not Available | Positive | 2602730 - 2605471 | 99409.1 |
| helix-turn-helix | SAMN05421804_10798 | Not Available | Positive | 2605720 - 2606754 | 40745.0 |
| hypothetical protein | SAMN05421804_10799 | Not Available | Positive | 2606907 - 2607056 | 5526.62 |
| uncharacterized membrane protein | SAMN05421804_107100 | Not Available | Negative | 2607078 - 2607827 | 26709.5 |
| gntr family transcriptional regulator / mocr family aminotransferase | SAMN05421804_107101 | Not Available | Positive | 2607933 - 2609327 | 53069.9 |
| ribosomal-protein-alanine n-acetyltransferase | SAMN05421804_107102 | Not Available | Positive | 2609330 - 2609848 | 19998.5 |
| hypothetical protein | SAMN05421804_107103 | Not Available | Positive | 2610062 - 2610571 | 19250.8 |
| hypothetical protein | SAMN05421804_107104 | Not Available | Positive | 2610615 - 2611283 | 24976.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
