Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | strain CGMCC 1.5058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
877739 bp
Thymine Count
893774 bp
Guanine Count
664573 bp
Cytosine Count
679392 bp
Genome Length
3119379 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domain | SAMN05421804_10753 | Not Available | Positive | 2564538 - 2565587 | 38607.9 |
| hypothetical protein | SAMN05421804_10754 | Not Available | Positive | 2565754 - 2566020 | 10979.2 |
| prolyl-trna synthetase | SAMN05421804_10756 | Not Available | Positive | 2566394 - 2567830 | 54484.4 |
| hypothetical protein | SAMN05421804_10757 | Not Available | Positive | 2567991 - 2568320 | 12797.4 |
| hypothetical protein | SAMN05421804_10758 | Not Available | Negative | 2568408 - 2568515 | 4039.23 |
| putative tm nitroreductase | SAMN05421804_10759 | Not Available | Negative | 2568551 - 2569345 | 30108.0 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | SAMN05421804_10760 | Not Available | Negative | 2569376 - 2569852 | 17249.3 |
| electron transport complex protein rnfc | SAMN05421804_10761 | Not Available | Positive | 2570286 - 2571644 | 49320.5 |
| electron transport complex protein rnfd | SAMN05421804_10762 | Not Available | Positive | 2571659 - 2573122 | 51888.6 |
| na+-translocating ferredoxin:nad+ oxidoreductase rnf, rnfg subunit | SAMN05421804_10763 | Not Available | Positive | 2573137 - 2574081 | 33477.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
