Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | strain CGMCC 1.5058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
877739 bp
Thymine Count
893774 bp
Guanine Count
664573 bp
Cytosine Count
679392 bp
Genome Length
3119379 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN05421804_10743 | Not Available | Positive | 2551029 - 2553452 | 92739.1 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05421804_10744 | Not Available | Negative | 2553522 - 2554163 | 24934.4 |
| 4fe-4s binding domain-containing protein | SAMN05421804_10745 | Not Available | Positive | 2554272 - 2554898 | 23975.4 |
| hydrophobe/amphiphile efflux-3 (hae3) family protein | SAMN05421804_10746 | Not Available | Positive | 2554982 - 2557819 | 104212.0 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05421804_10747 | Not Available | Negative | 2557891 - 2559621 | 67151.4 |
| hypothetical protein | SAMN05421804_10748 | Not Available | Positive | 2559711 - 2559821 | 4011.95 |
| fructose-1,6-bisphosphatase-3 | SAMN05421804_10749 | Not Available | Positive | 2560026 - 2562044 | 77839.0 |
| catechol 2,3-dioxygenase | SAMN05421804_10750 | Not Available | Negative | 2562149 - 2562940 | 30614.4 |
| protein of unknown function | SAMN05421804_10751 | Not Available | Negative | 2563074 - 2563565 | 18570.6 |
| hemolysin iii | SAMN05421804_10752 | Not Available | Positive | 2563713 - 2564360 | 24175.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
