Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | strain CGMCC 1.5058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
877739 bp
Thymine Count
893774 bp
Guanine Count
664573 bp
Cytosine Count
679392 bp
Genome Length
3119379 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, marr family | SAMN05421804_10733 | Not Available | Negative | 2540067 - 2540486 | 16209.8 |
| hypothetical protein | SAMN05421804_10734 | Not Available | Positive | 2540903 - 2541889 | 36818.6 |
| putative transcriptional regulator | SAMN05421804_10735 | Not Available | Positive | 2541905 - 2542135 | 8520.36 |
| hypothetical protein | SAMN05421804_10736 | Not Available | Positive | 2542125 - 2542961 | 32079.9 |
| protein of unknown function | SAMN05421804_10737 | Not Available | Positive | 2543134 - 2543688 | 19666.3 |
| short-chain dehydrogenase | SAMN05421804_10738 | Not Available | Negative | 2544444 - 2545298 | 31570.1 |
| 2,4-dienoyl-coa reductase | SAMN05421804_10739 | Not Available | Negative | 2545310 - 2547256 | 70201.3 |
| pucr c-terminal helix-turn-helix domain-containing protein | SAMN05421804_10740 | Not Available | Positive | 2547536 - 2549098 | 60311.5 |
| o-acetyl-adp-ribose deacetylase (regulator of rnase iii), contains macro domain | SAMN05421804_10741 | Not Available | Positive | 2549130 - 2550149 | 38831.6 |
| hypothetical protein | SAMN05421804_10742 | Not Available | Positive | 2550230 - 2550883 | 25023.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
