Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | strain CGMCC 1.5058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
877739 bp
Thymine Count
893774 bp
Guanine Count
664573 bp
Cytosine Count
679392 bp
Genome Length
3119379 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan/xylan/chitin deacetylase, pgda/cda1 family | SAMN05421804_1065 | Not Available | Positive | 2361971 - 2362918 | 35429.3 |
| putative iron-only hydrogenase system regulator | SAMN05421804_1066 | Not Available | Positive | 2363164 - 2363421 | 9520.8 |
| biotin synthase | SAMN05421804_1067 | Not Available | Positive | 2363422 - 2364483 | 40299.8 |
| 2-iminoacetate synthase | SAMN05421804_1068 | Not Available | Positive | 2364525 - 2365943 | 53808.4 |
| [fefe] hydrogenase h-cluster maturation gtpase hydf | SAMN05421804_1069 | Not Available | Positive | 2365956 - 2367149 | 44608.5 |
| Trna-met | Not Available | Not Available | Positive | 2367506 - 2367582 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 2367588 - 2367663 | Not Available |
| secondary thiamine-phosphate synthase enzyme | SAMN05421804_10613 | Not Available | Negative | 2367731 - 2368138 | 15102.1 |
| hypothetical protein | SAMN05421804_10614 | Not Available | Positive | 2368327 - 2368851 | 20312.8 |
| hypothetical protein | SAMN05421804_10615 | Not Available | Positive | 2368882 - 2371617 | 104420.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
