Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | strain CGMCC 1.5058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
877739 bp
Thymine Count
893774 bp
Guanine Count
664573 bp
Cytosine Count
679392 bp
Genome Length
3119379 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urocanate hydratase | SAMN05421804_105201 | Not Available | Negative | 2350557 - 2352563 | 74979.0 |
| hypothetical protein | SAMN05421804_105202 | Not Available | Positive | 2352819 - 2353442 | 23742.2 |
| hypothetical protein | SAMN05421804_105203 | Not Available | Negative | 2353536 - 2353997 | 17559.9 |
| lipid kinase, yegs/rv2252/bmru family | SAMN05421804_105204 | Not Available | Negative | 2354012 - 2354926 | 33853.4 |
| hypothetical protein | SAMN05421804_105205 | Not Available | Negative | 2355110 - 2356591 | 56655.3 |
| signal transduction histidine kinase | SAMN05421804_105206 | Not Available | Negative | 2356593 - 2357990 | 52131.9 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05421804_105207 | Not Available | Negative | 2358015 - 2358704 | 26463.0 |
| peptidoglycan/xylan/chitin deacetylase, pgda/cda1 family | SAMN05421804_105208 | Not Available | Negative | 2358747 - 2359715 | 36232.1 |
| hypothetical protein | SAMN05421804_1063 | Not Available | Negative | 2361129 - 2361308 | 6849.32 |
| soul heme-binding protein | SAMN05421804_1064 | Not Available | Positive | 2361440 - 2361952 | 20260.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
