Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | strain CGMCC 1.5058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
877739 bp
Thymine Count
893774 bp
Guanine Count
664573 bp
Cytosine Count
679392 bp
Genome Length
3119379 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligoendopeptidase f | SAMN05421804_105171 | Not Available | Negative | 2319703 - 2321496 | 68934.0 |
| zinc transport system substrate-binding protein | SAMN05421804_105172 | Not Available | Negative | 2321659 - 2322627 | 35512.9 |
| zinc transport system atp-binding protein | SAMN05421804_105173 | Not Available | Positive | 2322754 - 2323443 | 25783.7 |
| zinc transport system permease protein | SAMN05421804_105174 | Not Available | Positive | 2323443 - 2324234 | 28425.0 |
| hypothetical protein | SAMN05421804_105175 | Not Available | Positive | 2324387 - 2324818 | 15867.0 |
| hypothetical protein | SAMN05421804_105176 | Not Available | Positive | 2324875 - 2325210 | 13050.2 |
| 6-phosphofructokinase 1 | SAMN05421804_105177 | Not Available | Negative | 2325273 - 2326472 | 44057.3 |
| fe2+ or zn2+ uptake regulation protein | SAMN05421804_105178 | Not Available | Positive | 2326654 - 2327073 | 16330.0 |
| lrp/asnc family transcriptional regulator, leucine-responsive regulatory protein | SAMN05421804_105179 | Not Available | Positive | 2327227 - 2327691 | 17314.1 |
| protein of unknown function | SAMN05421804_105180 | Not Available | Negative | 2327739 - 2328839 | 41599.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
