Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | strain CGMCC 1.5058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
877739 bp
Thymine Count
893774 bp
Guanine Count
664573 bp
Cytosine Count
679392 bp
Genome Length
3119379 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfurase | SAMN05421804_105161 | Not Available | Negative | 2308653 - 2309768 | 40968.4 |
| alanyl-trna synthetase | SAMN05421804_105162 | Not Available | Negative | 2309831 - 2311096 | 48514.3 |
| phage shock protein pspc (stress-responsive transcriptional regulator) | SAMN05421804_105163 | Not Available | Positive | 2311260 - 2311628 | 14158.7 |
| polyhydroxyalkanoate synthesis regulator phasin | SAMN05421804_105164 | Not Available | Positive | 2311806 - 2312105 | 11348.9 |
| ubiquinone biosynthesis protein | SAMN05421804_105165 | Not Available | Positive | 2312139 - 2313755 | 61042.2 |
| hypothetical protein | SAMN05421804_105166 | Not Available | Negative | 2313848 - 2315101 | 48878.4 |
| tetratricopeptide repeat-containing protein | SAMN05421804_105167 | Not Available | Negative | 2315101 - 2316396 | 50069.5 |
| ribonuclease hi | SAMN05421804_105168 | Not Available | Negative | 2316699 - 2317358 | 24782.2 |
| uncharacterized membrane protein ykva, duf1232 family | SAMN05421804_105169 | Not Available | Negative | 2317412 - 2318500 | 41756.6 |
| rhomboid protease glup | SAMN05421804_105170 | Not Available | Negative | 2318616 - 2319593 | 36126.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
