Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | strain CGMCC 1.5058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
877739 bp
Thymine Count
893774 bp
Guanine Count
664573 bp
Cytosine Count
679392 bp
Genome Length
3119379 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-alpha-glucanotransferase | SAMN05421804_10591 | Not Available | Negative | 2229614 - 2231092 | 57246.0 |
| alpha-glucosidase | SAMN05421804_10592 | Not Available | Negative | 2231116 - 2233269 | 82233.8 |
| hypothetical protein | SAMN05421804_10593 | Not Available | Positive | 2233517 - 2234353 | 32021.5 |
| gag-polyprotein putative aspartyl protease | SAMN05421804_10594 | Not Available | Negative | 2234445 - 2235299 | 31861.0 |
| peptide/nickel transport system permease protein | SAMN05421804_10595 | Not Available | Negative | 2235302 - 2237821 | 94586.5 |
| spermidine/putrescine transport system substrate-binding protein | SAMN05421804_10596 | Not Available | Negative | 2237990 - 2239033 | 39559.6 |
| spermidine/putrescine transport system permease protein | SAMN05421804_10597 | Not Available | Negative | 2239092 - 2239880 | 29216.0 |
| spermidine/putrescine transport system permease protein | SAMN05421804_10598 | Not Available | Negative | 2239874 - 2240716 | 31694.0 |
| spermidine/putrescine transport system atp-binding protein | SAMN05421804_10599 | Not Available | Negative | 2240713 - 2241762 | 39097.8 |
| helix-turn-helix domain-containing protein | SAMN05421804_105100 | Not Available | Negative | 2241779 - 2242318 | 20207.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
