Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | strain CGMCC 1.5058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
877739 bp
Thymine Count
893774 bp
Guanine Count
664573 bp
Cytosine Count
679392 bp
Genome Length
3119379 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polar amino acid transport system substrate-binding protein | SAMN05421804_10521 | Not Available | Negative | 2145211 - 2146023 | 29144.8 |
| hypothetical protein | SAMN05421804_10522 | Not Available | Negative | 2146545 - 2146709 | 6273.01 |
| hypothetical protein | SAMN05421804_10523 | Not Available | Negative | 2146706 - 2147092 | 14662.9 |
| dna-binding response regulator, lytr/algr family | SAMN05421804_10524 | Not Available | Positive | 2147400 - 2148116 | 27631.3 |
| ghkl domain-containing protein | SAMN05421804_10525 | Not Available | Positive | 2148134 - 2149402 | 48565.2 |
| bira family transcriptional regulator, biotin operon repressor / biotin-[acetyl-coa-carboxylase] ligase | SAMN05421804_10526 | Not Available | Positive | 2149943 - 2150914 | 35688.9 |
| biotin transport system substrate-specific component | SAMN05421804_10527 | Not Available | Positive | 2150911 - 2151483 | 20482.3 |
| lpxtg-motif cell wall anchor domain-containing protein | SAMN05421804_10528 | Not Available | Negative | 2151581 - 2154034 | 92902.6 |
| ca-activated chloride channel family protein | SAMN05421804_10529 | Not Available | Negative | 2154499 - 2156892 | 91675.0 |
| membrane associated serine protease, rhomboid family | SAMN05421804_10530 | Not Available | Negative | 2157315 - 2158139 | 31775.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
