Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | strain CGMCC 1.5058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
877739 bp
Thymine Count
893774 bp
Guanine Count
664573 bp
Cytosine Count
679392 bp
Genome Length
3119379 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine carboxypeptidase | SAMN05421804_10511 | Not Available | Positive | 2133078 - 2134394 | 49297.8 |
| uncharacterized lipoprotein yddw, upf0748 family | SAMN05421804_10512 | Not Available | Positive | 2134522 - 2136330 | 69264.0 |
| hypothetical protein | SAMN05421804_10513 | Not Available | Negative | 2136421 - 2138703 | 85073.8 |
| pyrophosphatase ppax | SAMN05421804_10514 | Not Available | Negative | 2139009 - 2139662 | 24456.2 |
| hypothetical protein | SAMN05421804_10515 | Not Available | Negative | 2139889 - 2141109 | 46869.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421804_10516 | Not Available | Negative | 2141106 - 2141660 | 21942.5 |
| tetratricopeptide repeat-containing protein | SAMN05421804_10517 | Not Available | Positive | 2141867 - 2142811 | 36579.6 |
| ribonuclease bn, trna processing enzyme | SAMN05421804_10518 | Not Available | Negative | 2142881 - 2143609 | 27507.4 |
| polar amino acid transport system atp-binding protein | SAMN05421804_10519 | Not Available | Negative | 2143751 - 2144503 | 27679.0 |
| polar amino acid transport system permease protein | SAMN05421804_10520 | Not Available | Negative | 2144522 - 2145181 | 24710.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
