Proteiniclasticum ruminis strain CGMCC 1.5058

Rodanaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Proteiniclasticum

Description

Proteiniclasticum ruminis strain CGMCC 1.5058 is a notable bacterium characterized by possessing a single replicon. This trait indicates a streamlined genomic structure, which may contribute to its adaptability and efficiency in specific environments. The strain is cataloged under the accession number FNDZ00000000.1, providing a unique identifier for researchers seeking to locate genomic and taxonomic information about this organism. As a member of the genus Proteiniclasticum, this strain is likely involved in the degradation of proteins, which suggests its potential role in nutrient cycling within its ecological niche. While specific metabolic pathways and ecological interactions of Proteiniclasticum ruminis strain CGMCC 1.5058 are not detailed here, the genus itself is known for its contributions to the breakdown of complex organic materials, particularly in anaerobic environments such as the rumen of herbivorous animals. The presence of this bacterium within the digestive systems of ruminants may indicate its significance in enhancing the efficiency of nutrient absorption and digestion. This relationship not only highlights the importance of microbial communities in host nutrition but also emphasizes the ecological interactions between microorganisms and their hosts. Understanding the role of strains like Proteiniclasticum ruminis can provide insights into the complex dynamics of microbial ecosystems and their contributions to the health and productivity of ruminant livestock.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusProteiniclasticum
SpeciesProteiniclasticum ruminis
Strainstrain CGMCC 1.5058

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatantibiotic-contaminated sites adjacent to livestock facilities; sediment samples
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Proteiniclasticum ruminis strain CGMCC 1.5058 genome assembly,

Gene Summary

Adenine Count

877739 bp

Thymine Count

893774 bp

Guanine Count

664573 bp

Cytosine Count

679392 bp

Genome Length

3119379 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-alanyl-d-alanine carboxypeptidaseSAMN05421804_10511Not AvailablePositive2133078 - 213439449297.8
uncharacterized lipoprotein yddw, upf0748 familySAMN05421804_10512Not AvailablePositive2134522 - 213633069264.0
hypothetical proteinSAMN05421804_10513Not AvailableNegative2136421 - 213870385073.8
pyrophosphatase ppaxSAMN05421804_10514Not AvailableNegative2139009 - 213966224456.2
hypothetical proteinSAMN05421804_10515Not AvailableNegative2139889 - 214110946869.7
rna polymerase sigma-70 factor, ecf subfamilySAMN05421804_10516Not AvailableNegative2141106 - 214166021942.5
tetratricopeptide repeat-containing proteinSAMN05421804_10517Not AvailablePositive2141867 - 214281136579.6
ribonuclease bn, trna processing enzymeSAMN05421804_10518Not AvailableNegative2142881 - 214360927507.4
polar amino acid transport system atp-binding proteinSAMN05421804_10519Not AvailableNegative2143751 - 214450327679.0
polar amino acid transport system permease proteinSAMN05421804_10520Not AvailableNegative2144522 - 214518124710.8

Displaying genes 2001 – 2010 of 2943 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.