Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | strain CGMCC 1.5058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
877739 bp
Thymine Count
893774 bp
Guanine Count
664573 bp
Cytosine Count
679392 bp
Genome Length
3119379 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| manganese-dependent inorganic pyrophosphatase | SAMN05421804_104246 | Not Available | Positive | 2049921 - 2051558 | 60979.0 |
| protein of unknown function | SAMN05421804_104247 | Not Available | Positive | 2051626 - 2052045 | 15617.2 |
| had-superfamily subfamily ib hydrolase, tigr01490 | SAMN05421804_104248 | Not Available | Positive | 2052114 - 2052746 | 24554.9 |
| branched-chain amino acid aminotransferase | SAMN05421804_104249 | Not Available | Positive | 2052750 - 2053565 | 31193.8 |
| hypothetical protein | SAMN05421804_104250 | Not Available | Negative | 2053676 - 2053843 | 6174.43 |
| transcriptional regulatory protein, c terminal | SAMN05421804_104251 | Not Available | Positive | 2054036 - 2054710 | 26207.4 |
| atp-dependent dna helicase recq | SAMN05421804_104252 | Not Available | Negative | 2054743 - 2056878 | 82222.1 |
| aldehyde dehydrogenase (nad+) | SAMN05421804_104253 | Not Available | Negative | 2056928 - 2058337 | 52876.7 |
| nadph-dependent 2,4-dienoyl-coa reductase, sulfur reductase | SAMN05421804_104254 | Not Available | Negative | 2058338 - 2059720 | 50474.0 |
| uncharacterized membrane protein | SAMN05421804_104255 | Not Available | Positive | 2060059 - 2060637 | 20184.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
