Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | strain CGMCC 1.5058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
877739 bp
Thymine Count
893774 bp
Guanine Count
664573 bp
Cytosine Count
679392 bp
Genome Length
3119379 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trk system potassium uptake protein trkh | SAMN05421804_104112 | Not Available | Negative | 1910483 - 1911838 | 48600.9 |
| large subunit ribosomal protein l20 | SAMN05421804_104113 | Not Available | Negative | 1912071 - 1912427 | 13426.8 |
| large subunit ribosomal protein l35 | SAMN05421804_104114 | Not Available | Negative | 1912453 - 1912650 | 7575.6 |
| translation initiation factor if-3 | SAMN05421804_104115 | Not Available | Negative | 1912673 - 1913191 | 19709.1 |
| signal transduction histidine kinase | SAMN05421804_104116 | Not Available | Negative | 1913443 - 1914930 | 54880.4 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05421804_104117 | Not Available | Negative | 1914920 - 1915615 | 26658.2 |
| hypothetical protein | SAMN05421804_104118 | Not Available | Positive | 1915801 - 1916094 | 10838.4 |
| protein of unknown function | SAMN05421804_104119 | Not Available | Positive | 1916192 - 1916629 | 15694.6 |
| hypoxanthine-dna glycosylase | SAMN05421804_104120 | Not Available | Negative | 1916667 - 1917167 | 19363.3 |
| nucleoside-diphosphate kinase | SAMN05421804_104121 | Not Available | Positive | 1917259 - 1917654 | 14863.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
