Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | strain CGMCC 1.5058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
877739 bp
Thymine Count
893774 bp
Guanine Count
664573 bp
Cytosine Count
679392 bp
Genome Length
3119379 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chorismate mutase | SAMN05421804_10430 | Not Available | Positive | 1826808 - 1827170 | 13304.4 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | SAMN05421804_10431 | Not Available | Positive | 1827391 - 1828224 | 30785.2 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | SAMN05421804_10432 | Not Available | Positive | 1828221 - 1829321 | 40874.8 |
| hypothetical protein | SAMN05421804_10433 | Not Available | Positive | 1829428 - 1829967 | 19383.9 |
| acetyltransferase (gnat) family protein | SAMN05421804_10434 | Not Available | Positive | 1830144 - 1831028 | 34924.2 |
| aspartate aminotransferase | SAMN05421804_10435 | Not Available | Negative | 1831059 - 1832249 | 45220.8 |
| 2-aminoadipate transaminase | SAMN05421804_10436 | Not Available | Negative | 1832289 - 1833473 | 44493.1 |
| pp_01696 | SAMN05421804_10437 | Not Available | Positive | 1833732 - 1835081 | Not Available |
| dna mismatch repair protein muts | SAMN05421804_10438 | Not Available | Positive | 1835257 - 1837827 | 97147.0 |
| dna mismatch repair protein mutl | SAMN05421804_10439 | Not Available | Positive | 1837827 - 1839671 | 70203.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
