Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | strain CGMCC 1.5058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
877739 bp
Thymine Count
893774 bp
Guanine Count
664573 bp
Cytosine Count
679392 bp
Genome Length
3119379 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421804_103180 | Not Available | Positive | 1620499 - 1621620 | 41184.4 |
| tpr repeat | SAMN05421804_103181 | Not Available | Positive | 1621631 - 1623901 | 85464.3 |
| eama domain-containing membrane protein rard | SAMN05421804_103182 | Not Available | Negative | 1623965 - 1624870 | 33252.0 |
| phosphoglycerate dehydrogenase | SAMN05421804_103183 | Not Available | Positive | 1625043 - 1625990 | 35768.8 |
| uncharacterized conserved protein ybjq, upf0145 family | SAMN05421804_103184 | Not Available | Negative | 1626065 - 1626385 | 11323.6 |
| trna(ile)-lysidine synthase tils/mesj | SAMN05421804_103185 | Not Available | Positive | 1626615 - 1627511 | 34541.9 |
| protein-tyrosine-phosphatase | SAMN05421804_103186 | Not Available | Positive | 1627588 - 1627980 | 14437.2 |
| aldo/keto reductase | SAMN05421804_103187 | Not Available | Negative | 1628074 - 1628910 | 31520.9 |
| dephospho-coa kinase/methylglyoxal synthase | SAMN05421804_103188 | Not Available | Positive | 1629091 - 1629480 | 14264.4 |
| opine dehydrogenase | SAMN05421804_103189 | Not Available | Positive | 1629753 - 1630859 | 41390.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
