Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | strain CGMCC 1.5058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
877739 bp
Thymine Count
893774 bp
Guanine Count
664573 bp
Cytosine Count
679392 bp
Genome Length
3119379 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (pseudouridine1915-n3)-methyltransferase | SAMN05421804_103160 | Not Available | Negative | 1598791 - 1599189 | 15243.4 |
| acetyl esterase/lipase | SAMN05421804_103161 | Not Available | Negative | 1599240 - 1600238 | 37408.0 |
| tolb protein | SAMN05421804_103162 | Not Available | Negative | 1600471 - 1601565 | 39268.6 |
| signal transduction histidine kinase | SAMN05421804_103163 | Not Available | Negative | 1601661 - 1603139 | 56189.9 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05421804_103164 | Not Available | Negative | 1603136 - 1603828 | 26002.9 |
| dna-binding transcriptional regulator, merr family | SAMN05421804_103165 | Not Available | Positive | 1604114 - 1605349 | 47700.2 |
| fumarate reductase flavoprotein subunit | SAMN05421804_103166 | Not Available | Positive | 1605512 - 1607308 | 63943.9 |
| dna-binding transcriptional regulator, marr family | SAMN05421804_103167 | Not Available | Positive | 1607420 - 1607914 | 19004.4 |
| uncharacterized membrane protein ygae, upf0421/duf939 family | SAMN05421804_103168 | Not Available | Positive | 1607901 - 1608914 | 38609.9 |
| transcriptional regulator, contains xre-family hth domain | SAMN05421804_103169 | Not Available | Negative | 1608963 - 1609301 | 12883.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
