Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | strain CGMCC 1.5058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
877739 bp
Thymine Count
893774 bp
Guanine Count
664573 bp
Cytosine Count
679392 bp
Genome Length
3119379 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-2 type transport system permease protein | SAMN05421804_103140 | Not Available | Positive | 1574027 - 1574704 | 25549.4 |
| signal transduction histidine kinase | SAMN05421804_103141 | Not Available | Positive | 1574708 - 1575805 | 42141.1 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN05421804_103142 | Not Available | Positive | 1575802 - 1576419 | 22975.9 |
| flagellin | SAMN05421804_103143 | Not Available | Negative | 1576693 - 1578126 | 49754.5 |
| site-specific dna recombinase | SAMN05421804_103144 | Not Available | Negative | 1578636 - 1579865 | 46985.8 |
| uracil dna glycosylase superfamily protein | SAMN05421804_103145 | Not Available | Negative | 1579870 - 1580181 | 12084.6 |
| hypothetical protein | SAMN05421804_103146 | Not Available | Negative | 1580191 - 1580493 | 11326.6 |
| hypothetical protein | SAMN05421804_103147 | Not Available | Negative | 1580536 - 1580814 | 10765.7 |
| kap family p-loop domain-containing protein | SAMN05421804_103148 | Not Available | Positive | 1581538 - 1583484 | 75372.6 |
| hypothetical protein | SAMN05421804_103149 | Not Available | Negative | 1583511 - 1583852 | 13506.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
