Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | strain CGMCC 1.5058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
877739 bp
Thymine Count
893774 bp
Guanine Count
664573 bp
Cytosine Count
679392 bp
Genome Length
3119379 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| apolipoprotein d and lipocalin family protein | SAMN05421804_103110 | Not Available | Negative | 1543015 - 1543491 | 18817.0 |
| hypothetical protein | SAMN05421804_103111 | Not Available | Negative | 1543677 - 1544675 | 38592.1 |
| pyridoxamine 5'-phosphate oxidase | SAMN05421804_103112 | Not Available | Negative | 1544830 - 1545267 | 16583.1 |
| oligopeptide transport system permease protein | SAMN05421804_103113 | Not Available | Positive | 1545842 - 1546753 | 32949.2 |
| oligopeptide transport system permease protein | SAMN05421804_103114 | Not Available | Positive | 1546766 - 1547836 | 39199.9 |
| oligopeptide transport system atp-binding protein | SAMN05421804_103115 | Not Available | Positive | 1547841 - 1548860 | 37809.9 |
| oligopeptide transport system atp-binding protein | SAMN05421804_103116 | Not Available | Positive | 1548838 - 1549800 | 35938.8 |
| peptide/nickel transport system substrate-binding protein/oligopeptide transport system substrate-binding protein | SAMN05421804_103117 | Not Available | Positive | 1549913 - 1551655 | 63685.2 |
| radical sam additional 4fe4s-binding spasm domain-containing protein | SAMN05421804_103118 | Not Available | Negative | 1551777 - 1552655 | 33577.5 |
| tetr/acrr family transcriptional regulator, fatty acid metabolism regulator protein | SAMN05421804_103119 | Not Available | Positive | 1553260 - 1553826 | 21998.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
