Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | strain CGMCC 1.5058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
877739 bp
Thymine Count
893774 bp
Guanine Count
664573 bp
Cytosine Count
679392 bp
Genome Length
3119379 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421804_103100 | Not Available | Positive | 1533416 - 1533907 | 19335.2 |
| hypothetical protein | SAMN05421804_103101 | Not Available | Positive | 1533900 - 1534697 | 30077.6 |
| argininosuccinate lyase | SAMN05421804_103102 | Not Available | Negative | 1534773 - 1536161 | 52582.4 |
| na+/h+ antiporter nhac | SAMN05421804_103103 | Not Available | Negative | 1536186 - 1537712 | 54216.6 |
| hypothetical protein | SAMN05421804_103104 | Not Available | Negative | 1537978 - 1538313 | 13004.5 |
| protein of unknown function | SAMN05421804_103105 | Not Available | Negative | 1538314 - 1539639 | 47361.7 |
| hypothetical protein | SAMN05421804_103106 | Not Available | Positive | 1539880 - 1540122 | 9846.89 |
| hypothetical protein | SAMN05421804_103107 | Not Available | Positive | 1540151 - 1540501 | 13615.7 |
| glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferase | SAMN05421804_103108 | Not Available | Negative | 1540596 - 1541480 | 33694.9 |
| platelet-activating factor acetylhydrolase, isoform ii | SAMN05421804_103109 | Not Available | Negative | 1541621 - 1543015 | 52006.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
