Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | strain CGMCC 1.5058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
877739 bp
Thymine Count
893774 bp
Guanine Count
664573 bp
Cytosine Count
679392 bp
Genome Length
3119379 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3',5'-cyclic amp phosphodiesterase cpda | SAMN05421804_102378 | Not Available | Positive | 1424291 - 1425634 | 50228.1 |
| putative lysine transport system substrate-binding protein | SAMN05421804_102380 | Not Available | Positive | 1426092 - 1426910 | 29045.2 |
| putative lysine transport system permease protein | SAMN05421804_102381 | Not Available | Positive | 1426973 - 1427746 | 28856.2 |
| putative lysine transport system atp-binding protein | SAMN05421804_102382 | Not Available | Positive | 1427748 - 1428497 | 27742.7 |
| d-alanine-d-alanine ligase | SAMN05421804_102383 | Not Available | Positive | 1428646 - 1429656 | 37982.9 |
| nadph:quinone reductase | SAMN05421804_102384 | Not Available | Negative | 1429718 - 1430662 | 34591.4 |
| hypothetical protein | SAMN05421804_102385 | Not Available | Positive | 1430817 - 1431470 | 24855.7 |
| magnesium transporter | SAMN05421804_102386 | Not Available | Positive | 1431539 - 1432537 | 39102.6 |
| cu+-exporting atpase | SAMN05421804_102387 | Not Available | Positive | 1432611 - 1434890 | 81472.9 |
| copper chaperone copz | SAMN05421804_102388 | Not Available | Positive | 1434978 - 1435208 | 8364.31 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
